Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015947959.1_cds_XP_016489400.1_79927
CDS Infomation

[gene=LOC107809310] [db_xref=GeneID:107809310] [protein=protein ECERIFERUM 1-like] [protein_id=XP_016489400.1] [location=complement(join(44628..44810,44901..45074,45472..45570,45649..45849,46193..46300,46390..46765,48299..48518,50944..51176,52687..52913,53505..53564))] [gbkey=CDS]
Sequence

ATGGCTTCTAAACCAGGCATTCTAACAGAATGGCCATGGACATGGCTTGGGAACTTCAAG
TACGTGGTTTTGGCACCATATGTGGCTCACAGCCTACACTCATTCTTCATGAGCGAAGAT
GAAAGCAAGAGGGATATCACATACTTAATTATATTTCCATTTCTACTCTTCCGAATGCTT
CACAACCAGATATGGATATCCTTATCTCGCTACAGAACTGCCAAGGGTGATAACCGAATT
GTTGACAAGAGCATTGAATTTGATCAAGTTGACAGAGAAAGAAACTGGGATGATCAGATC
ATACTTAACGGACTGCTGTTCTACTATGGATACACGAAGCTGGAGCAGTCTCATCACATG
CCTATTTGGAGGACAGATGGGATCATTATGACAGCTTTGCTCCAAACTGGTCCTGTTGAA
TTTCTCTACTATTGGCTTCACAGAGCTTTACACCACCATTTCCTTTACTCTCGCTATCAT
TCTCATCACCATTCCTCCATTGTCACTGAACCCATTACTTCTGTGATTCATCCATTTGCA
GAGCATATAGCATACTTCTTGCTATTTGCCATCCCACTTCTCACAACTGTGCTAACTGGG
ACTGCTTCAATAGTTTCATTTGGTGGATATATTACTTATATTGATTTTATGAATAACATG
GGGCATTGCAACTTTGAGATCATTCCAAAGTGGATGTTCTCCAGCTTTCCCCCTCTCAAA
TACTTGATGTATACACCCTCGTATCATTCACTCCATCACACTCAATTTAGAACAAACTAC
TCGCTTTTTATGCCAATGTACGATTACATTTACGATACACTAGACAAATCTTCAGACACA
TTATACGAAAAATCACTTGAAAGGCAAGGCAAATCGCCGGATGTGGTGCACCTAACACAC
CTAACAACCCCAGAATCCATTTACCATCTCAGGCTAGGATTTGCTTCTTTTGCCTCGGAA
CCTTACACCTCTAAGTGGTATTTTTGGTTAATGTGGCCTGTTACATTGTGGTCTATGATG
ATTACTTGGATTTATGGTCACACATTTACTGTTGAGAGAAATGTGTTCAAGAGTCTGAAT
TTGCAAACTTGGGCGATCCCAAAATATCGCATACAATATTTTATGCAATGGCAAAGAGAG
ACGATTAACAACTTTATTGAGGAAGCTATCATGGAAGCAGATCGAAAAGGCATAAAAGTA
TTGAGCCTTGGACTCTTAAATCAGGAGGAGCAACTGAATAATAATGGTGAGCTTTACATA
AGAAGGCATCCTCAGCTCAAAGTGAAGGTGGTTGATGGAAGTAGCCTAGCTGTTGCTGTG
GTCCTAAACTCTATTCCTAAAGGAACCACACAAGTGGTCCTTGGAGGCCATTTGTCGAAA
GTTGCAAATGCGATTGCCCTTGCCTTATGCCAAGGAGGAGTAAAGGTTGTGACATTGCGA
GAAGAAGAGTACAAGAAGCTCAAATCAAGTCTTACCCCTGAAGTCGCAATTAATTTGGTT
CCCTCAAAAACATATGCTTCAAAGATATGGCTAGTAGGGGATGGATTGAGTGAAGATGAA
CAATTGAAAGCACCAAAAGGAACATTATTCATTCCCTTTTCACAATTCCCACCAAGGAAA
GCTCGCAAGGATTGCCTCTACTTTCACACACCAGCCATGATCACTCCAAAACACTTTGAA
AACGTGGACTCCTGTGAGAATTGGCTTCCAAGAAGAGTGATGAGCGCGTGGCGAGTAGCT
GGAATATTGCACGCACTGAAAGGCTGGAATGAGCATGAGTGTGGGAACATGATCTTTGAT
ATTGAGAAAGTCTGGAAAGCAAGTCTTGATCACGGTTTTAGCCCATTGACTATGGCTTCT
GCTTCTGAATCCAAGGCTTAA

Peptide Sequence

PEP ID

XP_016489400.1
PEP Infomation

PREDICTED: protein ECERIFERUM 1-like [Nicotiana tabacum]
Sequence

MASKPGILTEWPWTWLGNFKYVVLAPYVAHSLHSFFMSEDESKRDITYLIIFPFLLFRML
HNQIWISLSRYRTAKGDNRIVDKSIEFDQVDRERNWDDQIILNGLLFYYGYTKLEQSHHM
PIWRTDGIIMTALLQTGPVEFLYYWLHRALHHHFLYSRYHSHHHSSIVTEPITSVIHPFA
EHIAYFLLFAIPLLTTVLTGTASIVSFGGYITYIDFMNNMGHCNFEIIPKWMFSSFPPLK
YLMYTPSYHSLHHTQFRTNYSLFMPMYDYIYDTLDKSSDTLYEKSLERQGKSPDVVHLTH
LTTPESIYHLRLGFASFASEPYTSKWYFWLMWPVTLWSMMITWIYGHTFTVERNVFKSLN
LQTWAIPKYRIQYFMQWQRETINNFIEEAIMEADRKGIKVLSLGLLNQEEQLNNNGELYI
RRHPQLKVKVVDGSSLAVAVVLNSIPKGTTQVVLGGHLSKVANAIALALCQGGVKVVTLR
EEEYKKLKSSLTPEVAINLVPSKTYASKIWLVGDGLSEDEQLKAPKGTLFIPFSQFPPRK
ARKDCLYFHTPAMITPKHFENVDSCENWLPRRVMSAWRVAGILHALKGWNEHECGNMIFD
IEKVWKASLDHGFSPLTMASASESKA

Transcript Sequence

Gene sequence data has not been registered.